Shi, J., Dertouzos, J., Gafni, A., Steel, D., and Palfey, B. A. (2006)
"Single-Molecule Kinetics Reveals New Signatures of Half-Sites
Reactivity in Dihydroorotate Dehydrogenase A in Catalysis", Proc. Natl. Acad. Sci. USA, 103,
5775-5780
Fisher, H. F., Palfey, B. A., Maniscalco, S. J., and Indyk,; L. (2006)
"The Relationship Between Time-Dependence of a Transient-State Kinetic
Isotope Effect and the Location of Complexes in a Reaction Sequence", J. Phys. Chem. A, 110,
4465-4472
Brender, J. R., Dertouzos, J., Ballou, D. P., Massey, V., Palfey, B.
A., Entsch, B., Steel, D. G., and Gafni, A. (2005) "Conformational
Dynamics of the Isoalloxazine in Substrate-Free p-Hydroxybenzoate
Hydroxylase: Single-Molecule Studies", J. Am. Chem. Soc., 127,
18171-18178
Frederick, K. K. and Palfey, B. A. (2005) "Kinetics of Proton-linked Flavin Conformational Changes in p-Hydroxybenzoate Hydroxylase", Biochemistry, 44,
13304-13314
Gattis, S. G. and Palfey, B. A. (2005) "Direct Observation of the
Participation of Flavin in Product Formation by thyX-Encoded
Thymidylate Synthase", J. Am. Chem. Soc., 127,
832-833
Zheng, Y., Carey, P. R., and Carey, B. A. (2004) "The Raman Spectrum of Fully Reduced Flavin", J. Raman Spectroscopy, 35,
521-524
Shi, J., Palfey, B. A., Dertouzos, J., Jensen, K. F., Gafni, A., and
Steel, D. (2004) "Multiple States of the Tyr318Leu Mutant of
Dihydroorotate Dehydrogenase Revealed by Single Molecule Kinetics", J. Am. Chem. Soc., 126,
6914-6922
Palfey, B. A., Murthy, Y. V. S. N., and Massey, V. (2003) "Altered Balance
of Half-Reactions in p-Hydroxybenzoate Hydroxylase Caused by Substituting the
2'-Carbon of FAD with Fluorine", J. Biol. Chem., 278,
22210-22216
Argyrou, A., Blanchard, J. S., and Palfey, B. A. (2002) "The Lipoamide Dehydrogenase
from Mycobacterium tuberculosis Permits Direct Observation of Flavin Intermediates
in Catalysis", Biochemistry, 41, 14580-14590
Ottosen, M. B., Björnberg, O., Nørager, S., Larsen, S., Palfey, B.
A., and Jensen, K. F. (2002) "The Dimeric Dihydroorotate Dehydrogenase A
from Lactococcus Lactis Dissociates Reversibly into Inactive Monomers", Protein
Science, 11, 2575-2583
Wu, X., Palfey, B. A., Mossine, V. V., and Monier, V. M. (2001) "Kinetic
Studies, Mechanism and Substrate Specificity of Amadoriase I from Aspergillus
sp.", Biochemistry, 40, 12886-12895
Zheng, Y., Massey, V., Schaller, A., Palfey, B. A., and Carey, P. R. (2001) "Comparison
of Resonance Raman Spectra of Flavin-3,4 Dihydroxybenzoate Charge-Transfer Complexes
in Three Flavoenzymes", J. of Raman Spectroscopy, 32,
579-586
Palfey, B. A., Björnberg, O., and Jensen, K. F. (2001) "Specific Inhibition
of a Family 1A Dihydroorotate Dehydrogenase by Benzoate Pyrimidine Analogues", J.
Med. Chem., 44, 2861-2864
Björnberg, O., Jordan, D. B., Palfey, B. A., and Jensen, K. F. (2001) "Dihydrooxonate
is a Substrate of Dihydroorotate Dehydrogenase (DHOD) Providing Evidence for
Involvement of Cysteine and Serine in Base Catalysis", Arch. Biochem.
Biophys., 391, 286-294
Palfey, B. A., Björnberg, O., and Jensen, K. F. (2001) "Insight into
the Chemistry of Flavin Reduction and Oxidation in Escherichia coli Dihydroorotate
Dehydrogenase Obtained by Rapid Reaction Studies", Biochemistry, 40,
4381-4390
Frederick, K. K., Ballou, D. P., and Palfey, B. A. (2001) "Protein Dynamics
Control Proton Transfers to the Substrate on the His72Asn Mutant of p-
Hydroxybenzoate Hydroxylase", Biochemistry, 40,
3891-3899
Altose, M. D., Zheng, Y., Palfey, B. A., and Carey, P. R. (2001) "Comparing
Protein-Ligand Interactions in Solution and in Single Crystals by Raman Spectroscopy", Proc.
Nat. Acad. Sci. U.S.A, 98, 3006-3011
Palfey, B. A., Moran, G. R., Entsch, B., Ballou, D. P., and Massey, V. (1999) "Substrate
Recognition by "Password" in p- Hydroxybenzoate Hydroxylase", Biochemistry, 38,
1153-1158
Book Chapters
Palfey, B. A. (2003) "Mechanisms", Ch.
2A in Enzymes and Their Inhibition: Drug Development (Smith, H. J, and Simmons, C., eds.),
CRC Press, pp. 43-66
Palfey, B. A. (2003) "Time Resolved Spectral Analysis", Ch.
9 in Kinetic
Analysis of Macromolecules: A Practical Approach (Johnson, K. A., ed.),
Oxford University Press, pp. 203-228
Palfey, B. A., and Massey, V. (1998) "Flavin-Dependent Enzymes",
Ch. 29 in Comprehensive Biological Catalysis, volume III/Radical Reactions
and Oxidation/Reduction (Sinnott, M., ed.), Academic Press, pp. 83-154
Palfey, B. A., Ballou, D. P., and Massey, V. (1995) "Oxygen Activation
by Flavins and Pterins", Ch. 2 in Active Oxygen: Reactive Oxygen Species
in Biochemistry (Valentine, J. S., Foote, C. S., Greenburg, A., and Lieberman,
J. F., eds.), Chapman-Hall, pp. 37-83
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