MCTP/ ICAM Biophysics Workshop
Mechanics of Life: From Biomolecules to Molecular Machines 

June 11th - June 13th    340 West Hall, University of Michigan
1085 S.University Ave, Ann Arbor MI 48109

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Registration

Map
(from Hotel to West Hall)

SCIENTIFIC PROGRAM
(last updated 6/25/2007)

You can download slides (in PDF format) by clicking at the talk title. 

You can also  watch the videos of the talks (in Windows Media format .wmv).  LINUX users can watch the video with XINE or MPLAYER applications.  MAC users  need to install Windows Media Player  to watch the video.

MONDAY, June 11 2007

9:15
REGISTRATION, COFFEE, BAGELS  
9:30
Opening Remarks  
9:35
John Marko
Northwestern University
Micromechanical study of DNA-protein interactions and chromosome structure   (ppt)

Watch  video (wmv, 112M)

10:20
COFFEE BREAK  
10:40
Nils Walter
University of Michigan
Single Molecule Folding Reveals Mechanism of Ribozyme Action

Watch  video (wmv, 80M)

11:25-11:50
Ranjith Padinhateeri
University of Illinois at Chicago
 

Dynamics nucleosome assembly and dis-assembly (ppt)

Watch  video (wmv, 65M)

12:00
LUNCH  
1:30
Sanford Leuba  
University of Pittsburgh
DNA, Nucleosomes, and Molecular Motors: One-at-a-Time

Watch video (wmv, 127M)

2:15
Jon Widom
Northwestern University
 

A Genomic Code for Nucleosome Positioning (ppt)

Watch  video (wmv, 102M)

3:00
COFFEE BREAK  
3:15
Noel Perkins
University of Michigan
The Mechanics of DNA Looping and the Influence of Intrinsic DNA Curvature (ppt)

Watch  video (wmv, 269M)

4:00 Poster Snick Previews  Short oral talks by poster presenters (2 minutes each)
4:30-5:30 POSTER SESSION    
6:00
the PARTY (aka RECEPTION)  

TUESDAY, June 12 2007

9:15
COFFEE, BAGELS  
9:30
Maxim Frank-Kamenetski
Boston University
Fluctuational opening of base pairs in DNA (ppt)

Watch  video (wmv, 144M)

10:15
COFFEE BREAK  
10:35
Laura Finzi
Emory University
Lysogeny maintenance: a matter of looping (ppt)

Watch  video (wmv, 126M)

11:20-11:45
Yuri Popov
UCSB
 

Effects of DNA structure on its  micromechanical properties  (ppt)

Watch  video (wmv, 79M)

12:00
LUNCH  
1:30
Marcos Sotomayor
University  Illinois  Urbana-Champaign
Life under Tension: Molecular Mechanisms of Mechanosensitive Channels and Mechanical Sensors   (ppt)

Watch  video (wmv, 185M)

2:15 Ioulia Rouzina
University of Minnesota
 

Mechanical Measurement of Single Molecule Binding Rates: Kinetics of DNA Helix-Destabilization by T4 Gene 32 Protein (ppt)

Watch  video (wmv, 78M)

2:40
 Alex Vologodskii
 New York University 
 

Entropic Force: Insight from Brownian Dynamics Simulation (ppt)

Watch  video (wmv, 224M)

3:25
COFFEE BREAK  
3:45 Paul Selvin
University  Illinois  Urbana-Champaign
Single Molecule Measurements of Molecular Motors, in vitro and in vivo (ppt)

Watch  video1 video2  (wmv, 36M+128M)

4:30 Erin Craig
University of Oregon
 

Brownian Motors (ppt)

Watch   video (wmv, 70M)

5:15-5:40
Toan Nguyen
Georgia Tech
 

Multivalent counterions inhibit DNA ejection from viral capsid (ppt)

Watch  video (wmv, 49M)

6:30
DINNER  

WEDNESDAY, June 13 2007

9:00
COFFEE, BAGELS  
9:15
Alan Hunt
University of Michigan
Microtubule Assembly Dynamics at the Nanoscale (ppt)

Watch  video (wmv, 151M)

10:00
COFFEE BREAK  
10:15
Andy Stein
University of Michigan
Micromechanical Models for Collagen-I Gels
Watch  video (wmv, 81M)
10:40
Fred MacKintosh
 
VU Amsterdam
 

Non-equilibrium mechanics and fluctuations in the cytoskeleton  

Watch  video (wmv, 172M)

 11:25-11:30

Concluding Remarks  

Invited Speakers