Liao, B.-Y., N. M. Scott, and J. Zhang. 2006. Impacts of gene essentiality, expression pattern, and gene compactness on the evolutionary rate of mammalian proteins. Mol Biol Evol 23 : 2072-2080
Supplementary Materials for Wang, Z & J. Zhang. 2007. In search of the biological significance of modular structures in protein networks. PLoS Comput Biol
Additional Supplementary Materials for He, X., W. Qian, Z. Wang, Y. Li, and J. Zhang. 2010. Prevalent positive epistasis in Escherichia coli and Saccharomyces cerevisiae metabolic networks. Nat Genet, in press.
Additional Supplementary Materials for Qian, W., D. Ma, C. Xiao, Z. Wang, and J. Zhang. The genomic landscape of antagonistic pleiotropy in yeast. in submission.
Additional Supplementary Materials for J. Xu, and J. Zhang. 2014. Why human disease-associated residues appear as the wild-type in other species: genome-scale structural evidence for the compensation hypothesis. in submission.