Supplementary datasets and programs
for
Wang and Zhang (2007) In
search of the biological significance of modular structures in protein
networks. PLoS Computational Biology
3 (6): e107
PIC_PPI_network.txt Yeast
PIC network
PIC_funcat_filtered.txt Functional
categories of yeast proteins (PIC)
PIC_localization_filtered.txt Cellular
localizations of yeast proteins (PIC)
PIC_orf_mod.txt Module
ID for yeast proteins (PIC)
PEC_PPI_network.txt Yeast
PEC network
PEC_funcat_filtered.txt Functional
categories of yeast proteins (PEC)
PEC_localization_filtered.txt Cellular
localizations of yeast proteins (PEC)
PEC_orf_mod.txt Module
ID for yeast proteins (PEC)
Fly_PPI_conf_25.txt Fly
PPI network
Fly_orf_mod.txt Module
ID for fly proteins
Worm_PPI.txt Nematode
PPI network
Worm_orf_mod.txt Module
ID for nematode proteins
Net_grw_dupl.pl Perl
script to simulate network growth by gene duplication
random_rewiring.pl Perl
script to randomly rewire a network