Sequence alignments

Alignments of 6 genes from 199 fungal taxa used in AFTOL paper. Nature 443: 818-822 (link to alignments)

Alignment of ribosomal RNA (18S+28S+5.8S) of Chytridiomycete fungi used in Deep Hypha issue.
Mycologia 98: 860-871 (nexus file)

Alignment of ribosomal RNA (18S+28S+5.8S) of Zygomycete fungi used in Deep Hypha issue.
Mycologia 98: 872-884 (nexus file)

Alignment of ITS sequences from
Batrachochytrium dendrobatidis used in Schloegel et al. (2012), Mol. Ecol. 21: 5162 (nexus file)

Alignment of 53 proteins including
Paramicrosporidium saccamoebae used in Quandt et al. (2017), in review (zipped protein alignments in fasta)


Multilocus genotypes

Multilocus sequence typing scheme and data set of 59 global Batrachochytrium dendrobatidis isolates used in PLoS Pathog. 5: e1000458. (nexus file)

Multilocus sequence typing scheme and data set of 45
Batrachochytrium dendrobatidis isolates used in Schloegel et al. (2012), Mol. Ecol. 21: 5162. (Genepop file)

Multilocus microsatellite genotypes used in Malloure & James (2013), Heredity 110:355. (
Genepop file)


Genome assemblies

Leucoagaricus (JSC050730-01) genome data

Cyathus stercoreus (CS4.14) genome assembly (fasta file)


Population Genetics of Microbes Workshop, Beijing 2013


Fasta sequences of MAT proteins